FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005189178

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189178
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60662172
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG203700.07.36665159
CGCCGTA72250.05.940045455-59
GAGCGTC261600.05.87474358
AGAGCGT301350.05.2922827
ATCGGAA307500.05.2141431
Produced by FastQC (version 0.11.5)