FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005189192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57850657
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG246400.09.2049329
CGCCGTA67600.08.575397555-59
GAGCGTC301800.07.5632478
TCGCCGT82550.07.039928455-59
AGAGCGT340500.06.9164497
ATCGGAA376900.06.18333961
GCCGTAT101000.06.06959855-59
ATCGGCG18251.9375661E-45.95587169
GCGTCGG46250.05.9536433145
GTCGCCG101600.05.93390555-59
TCGGAAG393600.05.92838142
AAGAGCG415600.05.84106256
CGGAAGA419400.05.66720773
GCGTCGT229000.05.6640687145
CGTCGTG227200.05.4856877145
TGGTCGC119200.05.33741350-54
CGTATCA123200.05.211112560-64
GTCGATC31053.6321017E-65.13434173
GATCGGA344500.05.132294145
AGATCGG377500.05.0483537145
Produced by FastQC (version 0.11.5)