FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005189193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56169241
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA553900.011.1002211
TATGCCG142700.011.05988745-49
TCGGAAG564400.010.875752
CGGAAGA577250.010.6834663
CTCGTAT164750.09.70278240-44
CGTATGC166950.09.41868145-49
TCTCGTA159850.09.13890340-44
ATGCCGT174550.09.04179745-49
TATCTCG180000.07.995081440-44
GCCGTCT191150.07.991428450-54
AGAGCAC835800.07.81142577
AGCACAC859150.07.7087569
CGTCTTC219250.07.44976350-54
GAGCACA885750.07.44453148
ATCTCGT201750.07.34147840-44
CCGTCTT228700.07.078563750-54
TCGTATG186950.07.031175640-44
TGCCGTC186200.06.997239645-49
GAAGAGC938550.06.90230565
ACGCTCA247050.06.499921330-34
Produced by FastQC (version 0.11.5)