EGAF00005189330 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005189330
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28740605
Sequences flagged as poor quality	0
Sequence length	35-51
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	1594458	5.547753779017526	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGCG	175	5.8795194E-8	15.195346	6
TATGCCG	2500	0.0	12.9505	45
GATCGGA	1080	0.0	10.068878	1
ACGGCGA	360	4.0110717E-7	9.233351	7
CTCGTAT	2590	0.0	7.6408215	41
ATCGGAA	1380	0.0	7.5500007	2
TCTCGTA	2615	0.0	7.465835	40
ATGCCGT	2330	0.0	7.176738	45
CGGAAGA	2330	0.0	7.143551	1
GCCGTCT	2135	0.0	6.6217613	40
CGTATGC	3145	0.0	6.558196	43
TCGGAAG	1455	0.0	6.5512247	3
CGACGCT	385	0.004208825	6.4665394	42
ATCTCGT	3235	0.0	6.3037343	39
CGTCTGA	2850	0.0	6.2202706	13
TGCCGTC	2130	0.0	6.2073064	39
ACACGTC	2765	0.0	5.8505397	10
TCGTATG	3585	0.0	5.8081613	42
CGTCTTC	2665	0.0	5.4352903	42
CCGATCT	930	0.0019888724	5.355873	45