FastQCFastQC Report
Wed 8 May 2024
EGAF00005189641

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005189641
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3259026
Total Bases245.4 Mbp
Sequences flagged as poor quality0
Sequence length35-76
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph