FastQCFastQC Report
Wed 11 May 2022
EGAF00005198341

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005198341
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46258614
Sequences flagged as poor quality0
Sequence length60
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2672980.5778340008198257No Hit
TAAGGCATCATTATAACTAAAAATGGGATATATTCCTTATAAACTACTGCTAAGACAGCT481520.10409304524342212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)