FastQCFastQC Report
Fri 27 May 2022
EGAF00005199466

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005199466
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115588481
Sequences flagged as poor quality0
Sequence length35-101
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC2062350.17842175813349428No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG1784410.15437610950177638No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1420690.12290930616174461No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1216510.10524491623001776No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)