FastQCFastQC Report
Fri 27 May 2022
EGAF00005199470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005199470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences135369326
Sequences flagged as poor quality0
Sequence length35-101
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCC4368180.3226861009856842No Hit
ATCACATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGG2687630.19854054677054386No Hit
GTTGACTATTCTCTACAAACCACAAAGACATTGGAACACTATACCTATTA1940460.14334562026259923No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGCGCTAAGC1833430.1354391023561719No Hit
CTAAATACTACCGTATGGCCCACCATAATTACCCCCATACTCCTTACACT1560650.11528830393969754No Hit
CGCAAAATTAACCCCCTAATAAAATTAATTAACCACTCATTCATCGACCT1487760.10990377539443463No Hit
CATGCCTATCATATAGTAAAACCCAGCCCATGACCCCTAACAGGGGCCCT1479050.10926035045782823No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)