FastQCFastQC Report
Mon 13 May 2024
EGAF00005199793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005199793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91192707
Total Bases9.2 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTTAAGATTAGTGTAGATCTC3007470.32979281994556864Illumina Single End Sequencing Primer (100% over 31bp)

[OK]Adapter Content

Adapter graph