FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9317942
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA19800.018.4503671
AACGGCC28100.018.1625169
CCCGAAG20000.017.9907761
GAGACTT40900.017.9446351
AGAGAGT22650.017.7736728
GGGGTGA10650.017.6608165
GCATGAC27850.017.6146477
AGGGGTG11000.017.5988484
TCAACGG29350.017.4639347
CGATGCG18800.017.4417691
ATGCGGC16400.017.43788310
GAGACCC26200.017.429261
CGGGAAG14300.017.3835723
ACGGCCT29200.017.36530310
GTGGTAG18900.017.2263875
CGGTGTG16900.017.1172244
GCGCATG20700.017.1099935
AAGGCGA11150.017.0661497
TAACGAC25150.017.0193791
TGCGGAG15100.016.9724923
Produced by FastQC (version 0.11.5)