FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9170602
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA19450.018.1620331
AACGGCC27950.018.1035279
CGATGCG19450.017.9922941
GCACGTG22800.017.955071
GAGACTT40650.017.81331
CGGGAAG14600.017.7046783
CGGTGTG16050.017.6129074
GAGACCC25600.017.4957871
CGCTGAG15250.017.4549473
GCGCATG19550.017.4418545
GGGGTGA10200.017.3621485
ACGGCCT29100.017.3503910
AGAGAGT18750.017.306078
ACTAGCG13250.017.267335
ACTATGG37100.017.2634721
GGGCTAG12700.017.2354373
CGCATGG28850.017.203221
ACGGAAG17850.017.1390061
TCAACGG29550.017.1229297
CCCGAAG19350.017.1184561
Produced by FastQC (version 0.11.5)