FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200259

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200259
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9279724
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG13050.018.5473333
ACGGCCT25200.018.28817710
CCCGGAA19550.017.8439851
AAGGCGA10150.017.7714587
AACGGCC26150.017.7079129
GAGACCC26700.017.6405371
GCCTACG21800.017.50773410
GCCGTGA13550.017.4613761
GAGACTT41250.017.4474961
CAAGGCG12300.017.4372148
TGCGGAG12750.017.4305253
CGCTGAG17300.017.4250373
CGCATGG28600.017.3920861
TTGGGCG13800.017.384281
GCATGAC27500.017.198127
TAACGAC21500.016.9933471
CGAGGCT20200.016.9429231
GTGGAGA16700.016.935421
TACCGGG19700.016.9260541
AGGCGAC9500.016.9035078
Produced by FastQC (version 0.11.5)