FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7664237
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA15050.018.2053781
ACGGCCT24300.018.15070710
ACGGAAG14050.018.0914131
GCACGTG18650.018.0542491
GAGACCC21000.017.710641
AGAGAGT16200.017.652818
CGGGAAG10850.017.6438773
AACGATG15050.017.5450612
AACGGCC25300.017.5202379
GAGACTT35000.017.4800871
TCAACGG25100.017.440517
CGCTGAG13250.017.4372463
GTGGTAG15950.017.3825865
TAACGAC20550.017.3488241
GCATGAC23850.017.3400067
CGGTGTG14900.017.1307434
ATGGTTG28600.017.0825921
AAGGCGA8950.017.0821117
TATGGCG9300.017.03079610
GGCTAGT17900.017.0255534
Produced by FastQC (version 0.11.5)