FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8920679
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG12250.018.3221783
AAGGCGA10700.018.1944357
GGGGTGA9800.018.1875575
GAGACTT39950.018.1239551
CCCGAAG19900.017.9710791
AACGGCC27950.017.9051789
ACGGAAG16250.017.8769931
TCAACGG28350.017.8077357
ACGGCCT28250.017.71503610
GAGACCC25950.017.6400531
CGCATGG26650.017.6309031
CGATGCG19500.017.4368381
GCACGTG23100.017.3393691
CCCGGAA17850.017.260911
AGGGGTG10850.017.2386074
GCGCATG19100.017.165975
AGGGCGT8050.017.0842973
CGTAAGT28300.017.0695461
TAACGAC20250.017.0083891
CGCTGAG16200.016.9788383
Produced by FastQC (version 0.11.5)