FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200280

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200280
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8105684
Sequences flagged as poor quality0
Sequence length91
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAGCAGT522250.074.114951
AGCAGTG586050.065.972872
CAGTGGT757350.050.9502944
GCAGTGG787850.049.069863
AGTGGTA789200.048.9443975
TGGTATC826850.046.628947
GTGGTAT831050.046.451836
GGTATCA845700.045.6401988
GTATCAA858900.044.889819
CAACGCA845150.026.29898312-13
ATCAACG845500.026.28931810-11
ACGACGC3350.025.3918175
ACGCAGA884300.025.18125714-15
AGAGTAC873500.025.14298818-19
GCAGAGT884200.025.07394616-17
TACATGG863700.024.9192222-23
AGTACAT873200.024.91004820-21
TCAACGC840700.022.98763812-13
CATGGGA356100.022.81764224-25
CATGGGG348850.022.73264924-25
Produced by FastQC (version 0.11.5)