FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8123810
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACCC23350.017.958531
GAGACTT36450.017.8150561
ACGGCCT24650.017.76040510
AACGGCC24850.017.750159
GCCGTGA12150.017.6640831
GCGCATG17800.017.6115785
CCCGGAA17650.017.5847871
CGCTGAG14900.017.5696893
CGATGCG17550.017.559561
ACGGAAG14750.017.4604951
GCATGAC25200.017.4595417
CGGGAAG11050.017.4200383
AACGATG17450.017.3976142
GTGGTAG14300.017.3838425
ATACCCG22150.017.3808232
GCACGTG19550.017.3395041
CGTAAGT25700.017.3013881
AGAGAGT16900.017.2479658
GGGCTAG11300.017.2293223
TACCGGG16400.017.1802231
Produced by FastQC (version 0.11.5)