FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200295

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200295
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8078796
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACTT36100.017.984641
GCCGTGA11950.017.9565831
TCAACGG25250.017.9021917
TAACGAC19950.017.7611031
CGCTGAG14450.017.7425253
GAGACCC22300.017.715221
TGCGGAG14100.017.4805973
ACGGCCT25550.017.47675710
GCACGTG18650.017.465051
CGGGAAG11200.017.389323
AACGGCC26150.017.370179
AAGGCGA9900.017.3306627
ACCTGTG19350.017.2870144
AGGGCGT7650.017.2602543
CCCGGAA16900.017.2550471
TCGCCGA11000.017.0973638
CCCGAAG17950.017.0426561
ATACCCG21050.017.0409132
CGTGAGC20350.017.0323074
ACGGAAG14550.017.0167451
Produced by FastQC (version 0.11.5)