FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8091195
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGAC21250.017.8113521
GCATGAC26000.017.8108777
CGGGAAG10200.017.7940083
ACGGAAG16350.017.7657491
GAGACCC23400.017.7264961
GAGACTT36550.017.6403661
ACGGCCT24850.017.57289710
CCCGAAG16500.017.537561
GCCGTGA10750.017.5018921
TCAACGG25600.017.40177
AACGGCC25450.017.374719
CGTAAGT26450.017.3047371
CCCGGAA16650.017.24741
AAGGCGA8550.017.2391267
CGCATGG25500.017.2159141
CGATGCG15300.017.187151
ATGGTTG32150.017.1114331
TTGACCC20450.017.1092571
GCACGTG17850.017.0741421
CGCTGAG16350.016.9540233
Produced by FastQC (version 0.11.5)