FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200305

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200305
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9407847
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAG21400.018.0979881
ACGGAAG17900.017.887161
GAGACTT41650.017.8844281
GCACGTG22350.017.7717861
ACGGCCT29850.017.7616810
GGGGTGA10400.017.6635
CGCATGG28850.017.6577991
AACGGCC30450.017.5561929
TCAACGG30200.017.5558327
GAGACCC26950.017.5554141
CGGGAAG12350.017.5462883
CCAGCGC15650.017.4309486
CCCGGAA18600.017.3322941
CGATGCG18800.017.3234841
CGGTGTG19100.017.2194464
GCATGAC29350.017.2022767
GTGCGGA10600.017.1224692
AAGGCGA10350.017.1106647
ATGGTTG35000.017.1014231
CGTAAGT29600.017.0988751
Produced by FastQC (version 0.11.5)