FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8536040
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACTT37250.018.0769731
ACGGAAG17950.017.9598921
CGGGAAG11750.017.8803713
GAGACCC24450.017.6403731
CCCGGAA16100.017.5633681
ACGGCCT25550.017.47898110
TAACGAC21050.017.405751
TCAACGG25800.017.3096127
ATACCCG23900.017.2129252
CGTAAGT26600.017.2072811
AAGGCGA10950.017.177627
GCATGAC23850.017.1106537
AACGGCC26250.017.054789
GCACGTG19500.017.0401291
AGGGGTG12300.016.9914134
GGTGTGC12250.016.9709725
TTTGACT31650.016.964721
GCGCATG17450.016.9565645
AGCGCCG6750.016.9476918
CGCATGG26900.016.9335751
Produced by FastQC (version 0.11.5)