FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200315

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200315
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8657152
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA16700.018.1219841
GCACGTG20300.017.9440921
AAGGCGA10650.017.866637
GCCGTGA12200.017.8605521
GAGACTT38100.017.6195321
CGGGAAG12850.017.5533493
AACGGCC27250.017.5170869
AGAGAGT19500.017.4851048
AACGATG19450.017.4802682
ACGGAAG16200.017.458531
GGCTAGT20000.017.439684
ACGGCCT27500.017.23785610
TCAACGG27450.017.1894157
TGCGGAG13800.017.1422823
CGTAAGT26950.017.1097931
TAACGAC22550.016.9833071
GCATGAC26450.016.9660457
CCCGAAG19350.016.948251
ATGGTTG32500.016.930751
GCGCATG18400.016.923025
Produced by FastQC (version 0.11.5)