FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11490411
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAACGG33800.018.2566287
CGGGAAG18050.018.2236943
CCCGGAA22350.018.1162971
AAGGCGA13550.017.696677
TAACGAC29350.017.6942841
GAGACCC29000.017.6801971
GAGACTT49750.017.626431
ACGGAAG22000.017.6043151
CGATGCG20750.017.3922161
AACGGCC35650.017.3709379
CCCGAAG25100.017.3151
TACCGGG22250.017.1592621
ACGGCCT35950.017.13418610
CGGTGTG22450.017.1023314
GAAGAGG15000.017.015434
GCCGTGA16400.016.9736711
GCACGTG28050.016.9061051
AACGATG25100.016.8745882
CCAAGAC25150.016.8382557
CAGAGGC31750.016.8370868
Produced by FastQC (version 0.11.5)