Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005200321 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11474132 |
Sequences flagged as poor quality | 0 |
Sequence length | 28 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGGGAAG | 1490 | 0.0 | 18.160444 | 3 |
TCAACGG | 3645 | 0.0 | 18.015915 | 7 |
AAGGCGA | 1340 | 0.0 | 17.977068 | 7 |
TAACGAC | 2970 | 0.0 | 17.819788 | 1 |
GAGACTT | 5235 | 0.0 | 17.697395 | 1 |
ACGGCCT | 3710 | 0.0 | 17.670778 | 10 |
ACGGAAG | 2290 | 0.0 | 17.585695 | 1 |
AACGGCC | 3755 | 0.0 | 17.488152 | 9 |
CCCGAAG | 2550 | 0.0 | 17.432316 | 1 |
CCCGGAA | 2220 | 0.0 | 17.396748 | 1 |
GCACGTG | 2740 | 0.0 | 17.388063 | 1 |
CGATGCG | 2380 | 0.0 | 17.29054 | 1 |
AGGGGTG | 1620 | 0.0 | 17.110518 | 4 |
CGCATGG | 3530 | 0.0 | 17.081253 | 1 |
GGCTAGT | 2405 | 0.0 | 17.013962 | 4 |
GAGACCC | 3135 | 0.0 | 16.987198 | 1 |
ACCGGTA | 2930 | 0.0 | 16.968695 | 4 |
TTTGACT | 4380 | 0.0 | 16.956787 | 1 |
GCATGAC | 3420 | 0.0 | 16.917616 | 7 |
AGCCACG | 2690 | 0.0 | 16.89319 | 1 |