FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11474132
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG14900.018.1604443
TCAACGG36450.018.0159157
AAGGCGA13400.017.9770687
TAACGAC29700.017.8197881
GAGACTT52350.017.6973951
ACGGCCT37100.017.67077810
ACGGAAG22900.017.5856951
AACGGCC37550.017.4881529
CCCGAAG25500.017.4323161
CCCGGAA22200.017.3967481
GCACGTG27400.017.3880631
CGATGCG23800.017.290541
AGGGGTG16200.017.1105184
CGCATGG35300.017.0812531
GGCTAGT24050.017.0139624
GAGACCC31350.016.9871981
ACCGGTA29300.016.9686954
TTTGACT43800.016.9567871
GCATGAC34200.016.9176167
AGCCACG26900.016.893191
Produced by FastQC (version 0.11.5)