FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200327

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200327
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9541289
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA20150.018.4570311
GGGGTGA11150.017.9574155
GAGACTT41150.017.6479511
TTGACCC25850.017.6221921
AGGGGTG12800.017.6194044
CGATGCG19550.017.560141
CGGTGTG18400.017.3989284
CGCATGG30200.017.3792721
GAGACCC26050.017.3601821
GGGCTAG12500.017.338183
ACGGAAG18600.017.3330441
AACGATG21850.017.2700882
AACGGCC29050.017.2659669
GCGCATG21650.017.1753715
CGGGAAG13900.017.1748243
GCATGAC29300.017.1560977
TAACGAC24500.017.1560551
CCAGCGC17800.017.120766
ATACCCG25200.017.1134432
ATCGTCG16500.017.0688154
Produced by FastQC (version 0.11.5)