FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9538689
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACCC26250.018.1507681
GAGACTT42600.017.9519521
GCGCATG20900.017.7892075
CCCGGAA17350.017.7580381
AACGGCC29400.017.6597849
TCAACGG29600.017.6518557
CGGGAAG14200.017.5841523
ACGGCCT29450.017.51747110
ACGGAAG19050.017.3863321
CGCATGG29650.017.3683131
TAACGAC23350.017.2476791
GCATGAC29200.017.1779167
ATACCCG27750.017.1240672
CCCGAAG19000.017.0846021
TTAGCGG12300.017.0812239
CGTAAGT29650.016.9971941
GCACGTG23250.016.9432431
GGCTAGT20350.016.864614
ATCGTCG18600.016.8545864
AGAGAGT21700.016.8294168
Produced by FastQC (version 0.11.5)