FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11000822
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG15400.017.9305233
CCCGGAA24200.017.8686681
ACGGAAG22000.017.8050141
TTGGGCG15050.017.7658021
TAACGAC23450.017.6894171
GAGACTT47300.017.6328721
GAGACCC30900.017.6263241
AACGATG25550.017.6105292
GCGCATG23550.017.5646255
AACGGCC33000.017.4661089
GACCGTG12100.017.4594611
CGATGCG20350.017.4103091
TCAACGG32750.017.3978377
ACGGCCT33150.017.38707510
CGGTGTG20550.017.3449544
GGGGTGA12600.017.1130525
AGAGAGT22550.017.0726248
CCCGAAG22900.017.0572051
CCAGCGC20950.016.9619676
TAGCGGA13950.016.95286210
Produced by FastQC (version 0.11.5)