FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200349

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200349
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10019768
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACGTG23500.018.2611481
GAGACCC29150.018.118991
CCCGGAA20750.017.9768221
GAGACTT42900.017.9287991
AACGGCC30000.017.893159
AGGGGTG13500.017.8440844
TTGGGCG16000.017.8119351
TAACGAC23750.017.7909411
CGGGAAG14300.017.7687823
GCATGAC31550.017.6415717
ACGGCCT30350.017.577910
GGGGTGA11100.017.5401865
TAGCGGA13250.017.51662610
CGCATGG31550.017.4033371
CGATGCG18900.017.3494531
CGCTGAG17700.017.3385473
GGCTAGT18800.017.260294
AAGGCGA12500.017.2477387
CCAGCGC19150.017.2320276
TACCGGG21000.017.1864381
Produced by FastQC (version 0.11.5)