FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8641972
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACTT38350.018.1051831
GCCGTGA11550.018.0060621
TCAACGG27150.017.9057627
CCCGGAA17400.017.8968321
AACGGCC27150.017.7439239
ATACCCG24150.017.7237782
CGGGAAG11050.017.723273
GAGACCC21900.017.485341
ACGGCCT27550.017.4466810
GGCTAGT18250.017.4229264
GCGCATG19400.017.4109615
AAGGCGA10950.017.3769027
CGGTGTG17800.017.3070954
ACTATGG31500.017.2915341
TAGCGGA10250.017.27646810
CCCGAAG20000.017.2207971
GCATGAC27050.017.1994067
ACGGAAG15750.017.1867371
AGGGGTG10950.017.1817784
CGCATGG27500.017.1257671
Produced by FastQC (version 0.11.5)