FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200371

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200371
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10025595
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG14350.018.477473
TCAACGG30750.017.8843147
CGCTGAG18400.017.8784873
CGCATGG29800.017.8709491
GCGCATG20550.017.8282035
AACGGCC31350.017.6823679
TAACGAC23850.017.6235561
GCACGTG23450.017.5957161
ACGGCCT31200.017.59137710
GAGACCC27850.017.5813961
CCCGAAG22800.017.2769361
TTTGACT32750.017.2691251
CCCGGAA19550.017.2223821
TTGGGCG15250.017.172191
CGTAAGT31550.017.1586971
GAGACTT45000.017.1405221
ACGGAAG20850.017.098481
GCCGTGA13950.016.9583191
CGGTGTG19750.016.9348644
GGGCTAG13850.016.9202673
Produced by FastQC (version 0.11.5)