FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9094326
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCACGTG22300.018.2068611
ACGGAAG18450.018.1893461
CGGGAAG14000.018.0747723
GCCGTGA13600.017.9608841
TCAACGG27150.017.9466237
GAGACTT39550.017.8608511
ACGGCCT27250.017.80062510
GAGACCC24000.017.6965941
CGATGCG17650.017.5799661
TAGCGGA11350.017.54065910
TAACGAC20600.017.466031
AACGATG20300.017.3982642
TTGGGCG13100.017.3865221
CGGTGTG17350.017.3749714
AACGGCC28100.017.3398889
GCGCATG19250.017.2603365
CCCGGAA18000.017.2381341
GCATGAC28100.017.183327
GGGGTGA10700.017.17145
CCGGGAA11250.017.1152172
Produced by FastQC (version 0.11.5)