FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200381

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200381
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9106961
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACCC27250.018.6565671
CCCGAAG18950.018.233781
GAGACTT39500.018.191661
AAGGCGA10950.017.9810057
CCCGGAA17700.017.8428781
GCACGTG19650.017.7522341
TAACGAC21100.017.6796441
ACGGAAG16600.017.5005681
AACGGCC28850.017.4239989
CGTAAGT28050.017.4183241
TCAACGG29050.017.4175387
ACGGCCT28950.017.36390710
TAGCGGA12550.017.35406710
CGGGAAG13000.017.3454483
GTGGTAG16500.017.3326285
CGCATGG29600.017.2869171
GCGCATG20950.017.273765
ACCGGTA23000.017.1210444
AGAGAGT21300.017.0932038
AGCCACG20750.017.076311
Produced by FastQC (version 0.11.5)