FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9888203
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGAC24450.018.0461441
CCCGGAA19300.018.0155961
GAGACCC27100.017.9055711
CGGGAAG14900.017.8657233
ACGGCCT30800.017.78530710
GAGACTT44050.017.7350041
ACGGAAG19250.017.7194351
GCACGTG23350.017.6710871
TCAACGG30900.017.6562847
TACCGGG20400.017.4756661
AAGGCGA11400.017.1747847
CCCGAAG20450.017.163911
CGTGAGC25100.017.135414
AACGGCC32100.017.1335629
GCCGTGA14600.017.107711
CGATGCG20550.017.0268441
TATGGCG12350.017.01175310
CGTAAGT29750.016.976361
AGGGCGT9150.016.9507733
AATCGTG40100.016.8752271
Produced by FastQC (version 0.11.5)