FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200393

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200393
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8182230
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGGCCT26950.018.36715910
GAGACTT37350.018.2025071
CGGGAAG11500.018.1731723
AACGGCC27450.018.1528199
TCAACGG27400.018.0250327
CGCATGG25350.017.9661771
GGGCTAG11750.017.7865093
GCACGTG17300.017.6779561
AAGGCGA10250.017.5994977
CGGTGTG14600.017.554084
TACCGGG17250.017.47411
TAACGAC20300.017.449911
AGCCACG19850.017.4021321
GCATGAC24950.017.3702457
GAAGAGG11250.017.3059624
CGATGCG15300.017.2565171
ACGGAAG14550.017.2387281
GGCTAGT18650.017.1038594
AACGACG11400.017.0784592
AGGGGTG11200.016.9903774
Produced by FastQC (version 0.11.5)