FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8185718
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA17150.018.6054821
GCGCATG19600.018.2398075
GCATGAC27700.018.1074287
GAGACCC24250.018.1037351
CGATGCG16250.017.8754751
AACGATG18800.017.728952
GAGACTT35550.017.6727241
AAGGCGA9600.017.6449817
CGGGAAG11050.017.6201343
TCAACGG24750.017.599157
CGCATGG25600.017.3209651
GGGGTGA9150.017.3114855
GCCGTGA11350.017.2556441
TTAGCGG8800.017.1243829
ACGGCCT24800.017.1203510
AGAGAGT16000.017.1179228
ATACCCG21800.017.1057242
CCAGCGC15500.017.103136
CGTAAGT27000.017.0341131
ACGGAAG16200.016.9797781
Produced by FastQC (version 0.11.5)