FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8127566
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG10700.018.503993
ACGGAAG14300.018.1571981
CGATGCG14400.018.0311051
GCCGTGA12600.017.9874461
GAGACTT34650.017.9715711
GCGCATG18050.017.8551865
AACGGCC24100.017.8458169
GCACGTG19350.017.7965641
TAACGAC18550.017.793041
AAGGCGA9850.017.532247
CGCTGAG14900.017.4959983
CCCGGAA16250.017.467841
GCATGAC24850.017.4398927
TCAACGG24600.017.3041327
CGCATGG25400.017.2827171
ATGCGGC13750.017.27936410
AGCACTC27300.017.2447858
GAGACCC22400.017.239791
TTGGGCG13100.017.2169171
GGCTAGT18100.017.1981544
Produced by FastQC (version 0.11.5)