FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200405

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200405
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9473595
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTAG19850.018.1757955
CGGGAAG13600.017.8743863
CGATGCG18500.017.8409921
GAGACCC26300.017.6951451
CGCATGG28850.017.6565021
ACGGCCT30400.017.62138410
GCATGAC27700.017.5915477
GAGACTT42500.017.5772271
ACGGAAG17350.017.5650671
TCAACGG30750.017.4921767
CCCGAAG20150.017.472071
AAGGCGA11100.017.4409337
TAACGAC24350.017.4404561
CGGTGTG16150.017.4359344
TTGGGCG15150.017.2109641
GGGGTGA10100.017.207425
GCACGTG23850.017.2063961
AACGGCC31450.017.1030229
CCAGCGC15900.017.0183736
AACGATG20500.017.0091722
Produced by FastQC (version 0.11.5)