FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8466975
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG12150.019.1031673
GAGACTT36350.018.1886311
CGATGCG17050.017.8725031
TAACGAC21400.017.7865731
TCAACGG26450.017.7570427
TGCGGAG13550.017.6976833
ACGGCCT26650.017.66536710
GGGGTGA9800.017.6227135
CCCGAAG19150.017.5785331
CGCTGAG16350.017.4926193
GGGCTAG11400.017.4651763
TGTGCGG13350.017.3048571
AACGGCC27450.017.2306739
GTGGTAG15900.017.2266755
GAGACCC23700.017.2208881
GCGCATG20100.017.1843385
GCACGTG20600.017.142251
GCATGAC27100.017.1281977
AGGGGTG11050.017.1224294
AGAGAGT18200.017.103448
Produced by FastQC (version 0.11.5)