FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200421

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200421
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9593664
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACCC26150.018.138121
GAGACTT44750.018.050521
CGGGAAG13650.017.9702913
AACGGCC31700.017.9048679
TTAGCGG11450.017.8685029
CCCGGAA19000.017.8395441
TCAACGG31950.017.7647677
ACGGCCT31850.017.5787910
AGGGGTG12900.017.3096894
CGCTGAG18200.017.2853263
ACTATGG36750.017.2784631
CCCGAAG20750.017.2366121
GCCGTGA12350.017.1979621
GGCTAGT20700.017.1638644
GTGGTAG16650.017.1106385
CGTGAGC21650.017.0712094
GCACGTG22000.017.0576171
TAGCGGA12000.017.04952810
GCATGAC28400.017.041787
ACGGAAG17750.016.9878671
Produced by FastQC (version 0.11.5)