FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200423

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200423
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7886585
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGACTT36550.018.4242271
GAGACCC21800.018.0697351
CCCGGAA15100.017.998871
GCGCATG16650.017.9043735
TCAACGG26000.017.810997
CGCATGG22950.017.7875631
TAACGAC19250.017.7768541
CGTAAGT28050.017.7701281
ACGGCCT25900.017.75234810
ATACCCG21050.017.6111372
AGGGCGT7000.017.6004623
AACGGCC26350.017.5744119
ACGGAAG14150.017.5742681
CCCGAAG18300.017.3768881
GCATGAC23250.017.3155967
CGATGCG15000.017.311951
GCCGTGA11200.017.290991
GTAGCGC19550.017.1605978
TTGGGCG12550.017.0968531
GTGGTAG15550.017.048685
Produced by FastQC (version 0.11.5)