FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200425

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200425
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7958788
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA14700.018.6400181
TCAACGG25800.018.2902287
ACGGCCT25550.018.25393510
AACGGCC25650.018.2256539
GAGACTT36950.018.1668551
CGGGAAG11450.018.1567383
TAACGAC18600.017.9856051
ACGGAAG16000.017.6757351
AAGGCGA9150.017.6716777
CGGTGTG14650.017.6445984
GAGACCC24250.017.6069581
CCCGAAG17800.017.4338571
AACGATG19850.017.4002742
GCGCATG17900.017.3906145
AGAGAGT19350.017.3380578
CGTAAGT25500.017.2617241
CGATGCG17450.017.2159731
CGCATGG23550.017.1957571
GGCTAGT18950.017.1235714
ACTATGG31050.017.1178761
Produced by FastQC (version 0.11.5)