FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7982166
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG11950.018.1354053
TAACGAC19050.018.0227831
ACGGAAG14800.017.8448051
GCCGTGA12150.017.8423561
GCACGTG18500.017.785321
CCCGGAA16000.017.675651
AACGGCC26100.017.5737579
GAGACTT35900.017.563961
CGATGCG16800.017.4234681
GAGACCC22500.017.4112421
GCATGAC25400.017.4085037
GCGCATG18150.017.3953915
AAGGCGA9000.017.354617
TCAACGG26150.017.3298427
ACGGCCT26350.017.32353610
TTGGGCG11600.017.265361
AGGGCGT6900.017.2188263
ATACCCG20050.017.1736092
CGTAAGT26850.017.172441
GTGGTAG16300.017.0750435
Produced by FastQC (version 0.11.5)