FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200429

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200429
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7968311
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTGAG13750.018.1595063
GAGACTT35900.017.9022031
GCATGAC24450.017.8604567
GCACGTG17750.017.7319181
TACCGGG16450.017.7283381
ACGGCCT24550.017.69809510
CGGGAAG10650.017.558213
TCAACGG25200.017.5471447
GAGACCC21450.017.4950491
CGGTGTG14600.017.478984
CCCGAAG19700.017.3732971
ACTATGG31400.017.3485681
GCCGTGA10150.017.3477041
AACGATG19800.017.3332982
CCCGGAA16100.017.2934911
CGTAAGT25650.017.2904281
AGAGAGT16750.017.2711738
ACGGAAG15050.017.2569311
CGCATGG23950.017.231131
AAGGCGA9200.017.2169257
Produced by FastQC (version 0.11.5)