FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8334033
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGGCC24400.017.941829
ACGGCCT24300.017.92512310
GCCGTGA11100.017.8444271
AAGGCGA9750.017.7120297
GAGACCC21800.017.6670741
TCAACGG24650.017.6259867
ATACCCG23500.017.6012172
TGCGGAG13150.017.567443
CGGTGTG15100.017.4842364
CCCGGAA16000.017.4689521
GAGACTT36050.017.429461
CAAGGCG10200.017.3619698
GGCTAGT18250.017.2994144
GCATGAC25250.017.163597
CGCATGG25200.017.1610981
AACGATG19050.017.1507952
ACGGAAG18550.017.1437951
ATGGTTG30200.017.1255281
CGGGAAG10150.017.124033
AGCGGTG6900.017.0587434
Produced by FastQC (version 0.11.5)