FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8391071
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGGAAG11550.018.5709253
CCCGGAA18450.018.1922441
GAGACCC21650.018.044851
ACGGCCT25750.017.85582710
TTGGGCG12600.017.7299821
ATACCCG22650.017.7258952
TCAACGG25950.017.7182087
GTGGTAG15100.017.5558155
GAGACTT38300.017.5272541
CGATGCG15950.017.4559151
CCCGAAG18300.017.4393271
GCCGTGA11400.017.3760261
TAACGAC20650.017.319931
CGCATGG25800.017.3176571
AAGGCGA10250.017.2775827
AGCCACG19200.017.2523441
GGGGTGA9000.017.2328665
CCAGCGC16200.017.1785496
CGGTGTG16050.017.1334924
TACCGGG18200.017.1118871
Produced by FastQC (version 0.11.5)