FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9774299
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAACGG31300.018.4497177
CCCGGAA18750.018.36981
CGGGAAG13600.018.117733
CCAGCGC16850.018.0833576
GCACGTG24650.017.9907591
AACGGCC32750.017.9020089
GAGACCC26450.017.8897461
GAGACTT46550.017.8716011
AAGGCGA10700.017.7843117
CGCTGAG17400.017.5747953
ACGGCCT33400.017.52059210
CGCATGG28650.017.4378361
GCCGTGA13700.017.3498041
CGATGCG17850.017.3232561
AGCCACG23050.017.2344571
TACCGGG20650.017.2124961
ACGGAAG19700.017.204651
TAACGAC24950.017.2010691
TTGGGCG13950.017.1966421
GCGCATG21900.017.1783375
Produced by FastQC (version 0.11.5)