FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200457

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200457
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8127195
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGAGT16900.018.0292028
CCCGGAA17000.017.9295461
GCGCATG17650.017.8235455
GGGGTGA8050.017.763165
GCATGAC24350.017.6624347
CGATGCG15800.017.6198391
GAGACTT36800.017.5819871
CGGGAAG11700.017.5804983
GCACGTG19350.017.5717891
TAACGAC21400.017.533921
ATACCCG22700.017.4447782
CGTCTGG12650.017.3035556
ACGGAAG16100.017.2915151
TCAACGG25400.017.2787347
ACGGCCT25900.017.11578210
GAGACCC23150.017.1115721
AATCGTG31100.017.0185741
CGCATGG26850.017.007571
AACGACG11200.016.9909212
AAGGCGA8950.016.9601157
Produced by FastQC (version 0.11.5)