FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8187181
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGGAA17350.018.267391
ACGGCCT27600.018.25205210
GAGACCC22050.018.166711
CGCATGG25200.018.0356981
TCAACGG27900.018.016047
GAGACTT38650.017.9095461
AACGGCC28350.017.846689
CGGGAAG11400.017.7578473
ACGGAAG15100.017.5640051
AACGACG10550.017.5202162
CGGTGTG14050.017.4624794
CCCGAAG18250.017.4268321
TAACGAC20050.017.3442761
AGGGGTG9900.017.2255784
CGATGCG16650.017.1847251
GCACGTG21000.017.0836931
GCATGAC26350.017.0304817
CCTCGGA11850.016.9906526
ATACCCG23900.016.9407462
GAAGAGG11700.016.9263744
Produced by FastQC (version 0.11.5)