FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8575694
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCAACGG26350.018.741537
CGGTGTG15200.018.6021464
CGATGCG14600.018.1632441
CCCGGAA17700.018.0904311
ACGGCCT27300.017.96963910
GGCTAGT18800.017.8490664
GCCGTGA12950.017.758481
AACGGCC27750.017.677629
CGCTGAG14650.017.5733383
TAACGAC21750.017.5549431
CCCGAAG19350.017.514551
GAGACTT40150.017.5123541
AACGATG18750.017.4274462
GCATGAC27600.017.3746747
CGGGAAG13400.017.2421153
GAGGACG8900.017.1776627
GGTGTGC13150.017.1514825
TTGACCC22850.017.1432441
AAGGCGA9500.017.1347357
GCGCATG21000.017.131765
Produced by FastQC (version 0.11.5)