FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9831689
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG33300.020.3473037
CGGAGAT34400.019.6007379
TTGTGAG52750.019.3715176
GGGTAAG31950.018.90143
TCGGAGA35650.018.8826248
GGTGCCG17200.018.801367
CTTGTGA53550.018.7740145
GACTCTC53300.018.5995641
CGTGTGC36100.018.5863045
TCGTCGA31600.018.4832296
GCTCGAC26200.018.4723346
CACCGCT36550.018.4477548
CGGTGGA17950.018.26096
GCGATCC34150.018.2303964
CCGCTAG36300.018.21118710
ACCGCTA36450.018.1664229
GAGTAAT50350.018.15398410
GCCGATG40100.018.1368661
AGGTCGC28150.017.9351376
GACAATC40250.017.9279423
Produced by FastQC (version 0.11.5)