FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005200489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005200489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9558656
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAG31950.019.932837
CGGAGAT32350.019.6863679
TTGTGAG52950.019.48496
CGTGTGC33800.019.3625055
CTTGTGA54100.018.9690555
TCGGAGA33650.018.9258238
CCGCTAG32050.018.60093710
CGGGCAC27500.018.4786644
GAGTAAT50300.018.4341510
GCGATCC34450.018.3905434
ACCGCTA32450.018.3715539
AGCCGGA14250.018.3706028
GGGTAAG33350.018.3378893
GCCGATG39350.018.3151341
GCTCGAC25400.018.2742716
GGCATCC37050.018.257796
CACCGCT33400.018.1453958
CTCGAGG21050.018.1380631
GACTCTC52600.018.1153071
AGGTCGC29300.018.0191766
Produced by FastQC (version 0.11.5)